Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC013726.1-201ENST00000563747 2285 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 SPDYE11-202ENST00000450699 704 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 LINC01225-203ENST00000563550 1244 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 SPDYE9P-201ENST00000570642 692 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 SPDYE10P-202ENST00000612005 668 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 SPDYE8P-202ENST00000612377 668 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 AC106028.4-201ENST00000614509 607 ntBASIC14.25□□□□□ -0.13
SNX18Q96RF0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX18Q96RF0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX18Q96RF0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 AC006504.5-208ENST00000588784 2401 ntBASIC14.24□□□□□ -0.13
SNX18Q96RF0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.24□□□□□ -0.13
SNX18Q96RF0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms