Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC005089.1-201ENST00000619486 2241 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC004461.1-201ENST00000412461 403 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 GPS2P2-201ENST00000430745 888 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 RBPMS2P1-201ENST00000437762 623 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 SPDYE14P-201ENST00000442619 822 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC093520.2-201ENST00000561830 333 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC015910.1-201ENST00000579400 975 ntBASIC11.29□□□□□ -0.6
C9orf85Q96MD7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
C9orf85Q96MD7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 AC074338.1-201ENST00000416825 156 ntBASIC11.28□□□□□ -0.6
C9orf85Q96MD7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 YBX1P5-201ENST00000509441 847 ntBASIC11.28□□□□□ -0.6
C9orf85Q96MD7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 AC007191.1-201ENST00000623179 2995 ntBASIC11.28□□□□□ -0.6
C9orf85Q96MD7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C9orf85Q96MD7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms