Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTP4A1Q93096 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTP4A1Q93096 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTP4A1Q93096 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PTP4A1Q93096 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 FO393414.2-201ENST00000405153 598 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 MIR1233-2-201ENST00000408138 82 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 MIR1233-1-201ENST00000408722 82 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 BANF1P1-201ENST00000553684 263 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 SNHG9-202ENST00000564014 471 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 AC023511.2-201ENST00000618803 211 ntBASIC14.01□□□□□ -0.17
PTP4A1Q93096 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTP4A1Q93096 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTP4A1Q93096 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 ACE3P-201ENST00000423435 1973 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 AC067930.6-201ENST00000623257 4947 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14□□□□□ -0.17
PTP4A1Q93096 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 AP006288.1-201ENST00000446065 395 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 AC004967.1-201ENST00000453589 447 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14□□□□□ -0.17
PTP4A1Q93096 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms