Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TNPO1Q92973 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.55■□□□□ 0.56
TNPO1Q92973 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
TNPO1Q92973 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO1Q92973 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO1Q92973 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TNPO1Q92973 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TNPO1Q92973 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.54■□□□□ 0.56
TNPO1Q92973 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.54■□□□□ 0.56
TNPO1Q92973 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.54■□□□□ 0.56
TNPO1Q92973 AC105233.2-201ENST00000523697 349 ntBASIC18.54■□□□□ 0.56
TNPO1Q92973 AF228730.5-201ENST00000530288 346 ntBASIC18.54■□□□□ 0.56
TNPO1Q92973 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 AP000842.3-202ENST00000569238 1080 ntBASIC18.54■□□□□ 0.56
TNPO1Q92973 MIR3197-201ENST00000582241 73 ntBASIC18.54■□□□□ 0.56
TNPO1Q92973 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.54■□□□□ 0.56
TNPO1Q92973 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.54■□□□□ 0.56
TNPO1Q92973 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TNPO1Q92973 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO1Q92973 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO1Q92973 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 LINC01230-201ENST00000625222 3017 ntBASIC18.53■□□□□ 0.56
TNPO1Q92973 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TNPO1Q92973 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TNPO1Q92973 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.53■□□□□ 0.56
TNPO1Q92973 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.53■□□□□ 0.56
TNPO1Q92973 AL691432.1-201ENST00000596308 1422 ntBASIC18.53■□□□□ 0.56
TNPO1Q92973 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.53■□□□□ 0.56
TNPO1Q92973 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.53■□□□□ 0.56
TNPO1Q92973 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNPO1Q92973 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TNPO1Q92973 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.52■□□□□ 0.56
TNPO1Q92973 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.52■□□□□ 0.56
TNPO1Q92973 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TNPO1Q92973 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNPO1Q92973 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
TNPO1Q92973 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms