Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 RPS8P6-201ENST00000426177 609 ntBASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 AC073389.1-201ENST00000595595 795 ntBASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB3IL1Q8TBN0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAB3IL1Q8TBN0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 HNRNPDP1-201ENST00000439535 754 ntBASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 EEF1DP4-201ENST00000446006 880 ntBASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 AL161645.1-201ENST00000622716 1255 ntBASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB3IL1Q8TBN0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms