Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 CLK3P2-201ENST00000427566 1453 ntBASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 AC144831.1-201ENST00000573312 2656 ntBASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC087499.6-201ENST00000411576 835 ntBASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 PIN1P1-201ENST00000412108 996 ntBASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC007541.1-201ENST00000570282 1469 ntBASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC148Q8NFR7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AL353779.1-201ENST00000434793 351 ntBASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 RN7SL399P-201ENST00000471648 279 ntBASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 FAM86LP-201ENST00000478302 853 ntBASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AC093726.1-201ENST00000608064 963 ntBASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 AC022532.1-201ENST00000624563 1728 ntBASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms