Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PMS2P2-201ENST00000425039 1128 ntBASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CRLF3Q8IUI8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ZBED1P1-201ENST00000502364 1930 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AC002056.1-201ENST00000395613 760 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AC092474.2-201ENST00000424288 719 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AC140658.5-201ENST00000438532 169 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 REXO1L1P-202ENST00000608646 1974 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 KRT18P28-201ENST00000453838 1332 ntBASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms