Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AP005117.1-202ENST00000581724 1908 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 OR2I1P-209ENST00000641730 5365 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ANKRD19P-201ENST00000338192 862 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 AL162726.2-201ENST00000438986 1017 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 AC234783.1-201ENST00000441761 496 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 AC126177.1-201ENST00000547829 2218 ntBASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.06□□□□□ -0.16
RTL6Q6ICC9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 AL607033.1-201ENST00000623900 1599 ntBASIC14.05□□□□□ -0.16
RTL6Q6ICC9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 AC007326.2-201ENST00000624224 7579 ntBASIC14.05□□□□□ -0.16
RTL6Q6ICC9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.05□□□□□ -0.16
RTL6Q6ICC9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms