Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRICKLE4Q2TBC4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AC098850.1-201ENST00000419919 790 ntBASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 VDAC1P7-201ENST00000462417 847 ntBASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 RPL13AP25-201ENST00000484130 612 ntBASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PRICKLE4Q2TBC4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AL442647.2-201ENST00000429864 857 ntBASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC092552.1-201ENST00000547243 906 ntBASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC092364.2-202ENST00000597012 1073 ntBASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC107373.2-201ENST00000607735 490 ntBASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 AC006058.4-201ENST00000624016 1670 ntBASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRICKLE4Q2TBC4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms