Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.28■□□□□ 0.2
CBX1P83916 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CBX1P83916 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX1P83916 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX1P83916 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CBX1P83916 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX1P83916 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX1P83916 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CBX1P83916 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX1P83916 AC011700.1-201ENST00000610409 2627 ntBASIC16.28■□□□□ 0.2
CBX1P83916 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 WASH6P-202ENST00000359512 1437 ntBASIC16.28■□□□□ 0.2
CBX1P83916 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.27■□□□□ 0.2
CBX1P83916 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.27■□□□□ 0.2
CBX1P83916 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 AC009947.2-201ENST00000444014 672 ntBASIC16.27■□□□□ 0.2
CBX1P83916 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.27■□□□□ 0.2
CBX1P83916 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 AC113410.3-201ENST00000623366 203 ntBASIC16.27■□□□□ 0.2
CBX1P83916 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CBX1P83916 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX1P83916 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.27■□□□□ 0.19
CBX1P83916 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 CICP1-201ENST00000416803 2410 ntBASIC16.27■□□□□ 0.19
CBX1P83916 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.27■□□□□ 0.19
CBX1P83916 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC16.27■□□□□ 0.19
CBX1P83916 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CBX1P83916 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC16.27■□□□□ 0.19
CBX1P83916 WASH3P-207ENST00000560956 1394 ntBASIC16.26■□□□□ 0.19
CBX1P83916 FO538757.1-201ENST00000623083 1397 ntBASIC16.26■□□□□ 0.19
CBX1P83916 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 HBZP1-201ENST00000354915 429 ntBASIC16.26■□□□□ 0.19
CBX1P83916 ABHD17AP1-201ENST00000358206 933 ntBASIC16.26■□□□□ 0.19
CBX1P83916 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.26■□□□□ 0.19
CBX1P83916 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 TMEM198B-204ENST00000484016 896 ntBASIC16.26■□□□□ 0.19
CBX1P83916 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.26■□□□□ 0.19
CBX1P83916 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.26■□□□□ 0.19
CBX1P83916 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CBX1P83916 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CBX1P83916 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms