Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AGAP7P-201ENST00000582299 2062 ntBASIC13.6□□□□□ -0.23
HIST1H3AP68431 AGAP14-201ENST00000624701 2060 ntBASIC13.6□□□□□ -0.23
HIST1H3AP68431 WASH3P-207ENST00000560956 1394 ntBASIC13.6□□□□□ -0.23
HIST1H3AP68431 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AC025181.2-201ENST00000606994 802 ntBASIC13.6□□□□□ -0.23
HIST1H3AP68431 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AC099063.4-201ENST00000641099 1602 ntBASIC13.6□□□□□ -0.23
HIST1H3AP68431 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H3AP68431 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AC004890.2-204ENST00000481968 304 ntBASIC13.59□□□□□ -0.23
HIST1H3AP68431 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AL391069.4-201ENST00000609583 481 ntBASIC13.59□□□□□ -0.23
HIST1H3AP68431 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms