Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC068137.2-201ENST00000605408 478 ntBASIC17.51■□□□□ 0.39
TPM4P67936 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.51■□□□□ 0.39
TPM4P67936 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
TPM4P67936 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM4P67936 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM4P67936 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 AC139749.1-202ENST00000617529 3139 ntBASIC17.5■□□□□ 0.39
TPM4P67936 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.5■□□□□ 0.39
TPM4P67936 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 AL031284.1-201ENST00000419297 478 ntBASIC17.5■□□□□ 0.39
TPM4P67936 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.5■□□□□ 0.39
TPM4P67936 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
TPM4P67936 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.5■□□□□ 0.39
TPM4P67936 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.5■□□□□ 0.39
TPM4P67936 MIR7706-201ENST00000613747 67 ntBASIC17.5■□□□□ 0.39
TPM4P67936 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM4P67936 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TPM4P67936 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TPM4P67936 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TPM4P67936 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TPM4P67936 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM4P67936 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TPM4P67936 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM4P67936 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM4P67936 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM4P67936 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM4P67936 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM4P67936 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM4P67936 AC112191.1-201ENST00000523689 701 ntBASIC17.49■□□□□ 0.39
TPM4P67936 KRT19P2-202ENST00000557173 1012 ntBASIC17.49■□□□□ 0.39
TPM4P67936 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM4P67936 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM4P67936 AC116407.3-201ENST00000623905 1129 ntBASIC17.49■□□□□ 0.39
TPM4P67936 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.49■□□□□ 0.39
TPM4P67936 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
TPM4P67936 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TPM4P67936 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM4P67936 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 AL136982.4-201ENST00000437689 1740 ntBASIC17.48■□□□□ 0.39
TPM4P67936 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms