Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.53□□□□□ -0.24
UBA52P62987 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.53□□□□□ -0.24
UBA52P62987 AC236430.1-201ENST00000402231 743 ntBASIC13.53□□□□□ -0.24
UBA52P62987 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.53□□□□□ -0.24
UBA52P62987 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.53□□□□□ -0.24
UBA52P62987 AC002472.2-201ENST00000442739 958 ntBASIC13.53□□□□□ -0.24
UBA52P62987 TSPY16P-201ENST00000449843 468 ntBASIC13.53□□□□□ -0.24
UBA52P62987 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.53□□□□□ -0.24
UBA52P62987 POU5F1P6-201ENST00000466990 990 ntBASIC13.53□□□□□ -0.24
UBA52P62987 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.53□□□□□ -0.24
UBA52P62987 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UBA52P62987 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.53□□□□□ -0.24
UBA52P62987 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.53□□□□□ -0.24
UBA52P62987 AC005412.3-201ENST00000580309 715 ntBASIC13.53□□□□□ -0.24
UBA52P62987 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 AL035252.4-201ENST00000624174 288 ntBASIC13.53□□□□□ -0.24
UBA52P62987 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.53□□□□□ -0.24
UBA52P62987 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 UXT-AS1-201ENST00000590504 1525 ntBASIC13.53□□□□□ -0.24
UBA52P62987 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.53□□□□□ -0.24
UBA52P62987 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.52□□□□□ -0.24
UBA52P62987 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.52□□□□□ -0.24
UBA52P62987 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UBA52P62987 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.52□□□□□ -0.24
UBA52P62987 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.52□□□□□ -0.24
UBA52P62987 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBA52P62987 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.52□□□□□ -0.25
UBA52P62987 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
UBA52P62987 HMGA1P7-201ENST00000406908 502 ntBASIC13.52□□□□□ -0.25
UBA52P62987 SPDYE7P-202ENST00000420373 878 ntBASIC13.52□□□□□ -0.25
UBA52P62987 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 IGHV3-42-201ENST00000520410 361 ntBASIC13.52□□□□□ -0.25
UBA52P62987 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.52□□□□□ -0.25
UBA52P62987 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 KRT8P23-201ENST00000560090 1207 ntBASIC13.52□□□□□ -0.25
UBA52P62987 AC140878.1-201ENST00000565277 250 ntBASIC13.52□□□□□ -0.25
UBA52P62987 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.52□□□□□ -0.25
UBA52P62987 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 ST20-AS1-201ENST00000560255 4223 ntBASIC13.52□□□□□ -0.25
UBA52P62987 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 MROH4P-201ENST00000431302 1578 ntBASIC13.52□□□□□ -0.25
UBA52P62987 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBA52P62987 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UBA52P62987 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBA52P62987 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms