Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 AC092910.1-201ENST00000482027 1129 ntBASIC14.28□□□□□ -0.12
CDC42P60953 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 UNC93B6-202ENST00000528242 690 ntBASIC14.28□□□□□ -0.12
CDC42P60953 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CDC42P60953 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.27□□□□□ -0.12
CDC42P60953 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.27□□□□□ -0.12
CDC42P60953 AC117489.1-201ENST00000625169 3217 ntBASIC14.27□□□□□ -0.12
CDC42P60953 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
CDC42P60953 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42P60953 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDC42P60953 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.27□□□□□ -0.12
CDC42P60953 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDC42P60953 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.27□□□□□ -0.12
CDC42P60953 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC42P60953 KRT18P67-201ENST00000432816 1264 ntBASIC14.27□□□□□ -0.13
CDC42P60953 HCG4B-203ENST00000450128 991 ntBASIC14.27□□□□□ -0.13
CDC42P60953 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC42P60953 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC42P60953 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.27□□□□□ -0.13
CDC42P60953 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42P60953 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDC42P60953 AC073389.1-201ENST00000595595 795 ntBASIC14.27□□□□□ -0.13
CDC42P60953 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42P60953 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42P60953 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42P60953 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CDC42P60953 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDC42P60953 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 ACE3P-201ENST00000423435 1973 ntBASIC14.27□□□□□ -0.13
CDC42P60953 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42P60953 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42P60953 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms