Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.68□□□□□ -0.22
DEFA3P59666 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DEFA3P59666 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DEFA3P59666 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 INGX-201ENST00000359239 846 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 AL390955.1-201ENST00000428694 934 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.67□□□□□ -0.22
DEFA3P59666 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 LINC01023-201ENST00000606054 436 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 AL353801.3-201ENST00000609898 542 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 REXO1L3P-201ENST00000622202 1288 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 AC113410.3-201ENST00000623366 203 ntBASIC13.67□□□□□ -0.22
DEFA3P59666 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
DEFA3P59666 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA3P59666 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA3P59666 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
DEFA3P59666 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
DEFA3P59666 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 Z83836.1-201ENST00000624605 1642 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms