Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 AC006058.4-201ENST00000624016 1670 ntBASIC17.83■□□□□ 0.45
CHMP4BP1P59074 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP4BP1P59074 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 AC022210.1-201ENST00000449856 793 ntBASIC17.83■□□□□ 0.44
CHMP4BP1P59074 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 AC092337.1-201ENST00000568699 1129 ntBASIC17.83■□□□□ 0.44
CHMP4BP1P59074 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP4BP1P59074 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AL691432.1-201ENST00000596308 1422 ntBASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AC063926.3-201ENST00000624734 5658 ntBASIC17.82■□□□□ 0.44
CHMP4BP1P59074 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 RARRES2P5-201ENST00000564013 466 ntBASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP4BP1P59074 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 AC006449.6-201ENST00000612330 2296 ntBASIC17.81■□□□□ 0.44
CHMP4BP1P59074 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP4BP1P59074 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms