Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK4P57078 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RIPK4P57078 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK4P57078 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RIPK4P57078 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.26■□□□□ 0.83
RIPK4P57078 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.26■□□□□ 0.83
RIPK4P57078 AP001063.1-201ENST00000568332 529 ntBASIC20.26■□□□□ 0.83
RIPK4P57078 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.26■□□□□ 0.83
RIPK4P57078 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.26■□□□□ 0.83
RIPK4P57078 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.26■□□□□ 0.83
RIPK4P57078 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RIPK4P57078 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK4P57078 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RIPK4P57078 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RIPK4P57078 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK4P57078 PPT1-215ENST00000641471 2368 ntBASIC20.26■□□□□ 0.83
RIPK4P57078 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
RIPK4P57078 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.25■□□□□ 0.83
RIPK4P57078 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK4P57078 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK4P57078 USP32P1-208ENST00000506594 1164 ntBASIC20.25■□□□□ 0.83
RIPK4P57078 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK4P57078 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK4P57078 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK4P57078 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK4P57078 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 AC007787.1-201ENST00000588095 1583 ntBASIC20.25■□□□□ 0.83
RIPK4P57078 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RIPK4P57078 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK4P57078 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK4P57078 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.24■□□□□ 0.83
RIPK4P57078 SLC25A47P1-201ENST00000531577 414 ntBASIC20.24■□□□□ 0.83
RIPK4P57078 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.24■□□□□ 0.83
RIPK4P57078 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 AC015936.2-201ENST00000593177 259 ntBASIC20.24■□□□□ 0.83
RIPK4P57078 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK4P57078 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK4P57078 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms