Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
COL8A2P25067 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
COL8A2P25067 SOCS2P1-201ENST00000417727 557 ntBASIC13.14□□□□□ -0.31
COL8A2P25067 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.14□□□□□ -0.31
COL8A2P25067 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.14□□□□□ -0.31
COL8A2P25067 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 AC015936.2-201ENST00000593177 259 ntBASIC13.14□□□□□ -0.31
COL8A2P25067 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.14□□□□□ -0.31
COL8A2P25067 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
COL8A2P25067 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
COL8A2P25067 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.13□□□□□ -0.31
COL8A2P25067 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.13□□□□□ -0.31
COL8A2P25067 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 CROCCP4-201ENST00000457096 498 ntBASIC13.13□□□□□ -0.31
COL8A2P25067 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
COL8A2P25067 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 AC015910.1-201ENST00000579400 975 ntBASIC13.13□□□□□ -0.31
COL8A2P25067 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.13□□□□□ -0.31
COL8A2P25067 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 AC073347.1-201ENST00000421633 2643 ntBASIC13.13□□□□□ -0.31
COL8A2P25067 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 DRD5P1-201ENST00000456605 1438 ntBASIC13.13□□□□□ -0.31
COL8A2P25067 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.13□□□□□ -0.31
COL8A2P25067 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COL8A2P25067 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
COL8A2P25067 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms