Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MIR346-201ENST00000362234 95 ntBASIC13.23□□□□□ -0.29
HIST1H1DP16402 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.23□□□□□ -0.29
HIST1H1DP16402 SLC25A6P4-201ENST00000586535 553 ntBASIC13.23□□□□□ -0.29
HIST1H1DP16402 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AC067750.1-201ENST00000608826 6545 ntBASIC13.23□□□□□ -0.29
HIST1H1DP16402 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 INTS4P1-203ENST00000641008 3683 ntBASIC13.23□□□□□ -0.29
HIST1H1DP16402 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1DP16402 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1DP16402 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 GHSR-202ENST00000427970 912 ntBASIC13.22□□□□□ -0.29
HIST1H1DP16402 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H1DP16402 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1DP16402 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H1DP16402 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
HIST1H1DP16402 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1DP16402 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms