Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.38■□□□□ 0.37
HOXC6P09630 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC6P09630 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
HOXC6P09630 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC6P09630 AC097724.1-201ENST00000609581 426 ntBASIC17.38■□□□□ 0.37
HOXC6P09630 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC6P09630 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC6P09630 AC069224.1-201ENST00000566372 1715 ntBASIC17.38■□□□□ 0.37
HOXC6P09630 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXC6P09630 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 AC018695.7-201ENST00000624587 2492 ntBASIC17.37■□□□□ 0.37
HOXC6P09630 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HOXC6P09630 MIR769-201ENST00000390225 118 ntBASIC17.37■□□□□ 0.37
HOXC6P09630 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 IMP3P2-201ENST00000489760 475 ntBASIC17.37■□□□□ 0.37
HOXC6P09630 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXC6P09630 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXC6P09630 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXC6P09630 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 TUBBP5-203ENST00000508529 1334 ntBASIC17.37■□□□□ 0.37
HOXC6P09630 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC6P09630 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC6P09630 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC6P09630 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HOXC6P09630 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 FXNP2-201ENST00000411625 547 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 AL354877.1-201ENST00000424412 413 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 SPTLC1P5-201ENST00000450718 252 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.36■□□□□ 0.37
HOXC6P09630 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.36■□□□□ 0.37
HOXC6P09630 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.36■□□□□ 0.37
HOXC6P09630 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
HOXC6P09630 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.36■□□□□ 0.37
HOXC6P09630 MIR4722-201ENST00000578292 60 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.36■□□□□ 0.37
HOXC6P09630 OR10B1P-201ENST00000601666 907 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 AP001505.2-201ENST00000616815 443 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 CU633904.3-201ENST00000624042 1029 ntBASIC17.36■□□□□ 0.37
HOXC6P09630 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HOXC6P09630 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC6P09630 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HOXC6P09630 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 AL603832.2-201ENST00000566195 2125 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 AL391005.1-201ENST00000623953 2435 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms