Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
CTSDP07339 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CTSDP07339 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 AL139010.1-201ENST00000454878 894 ntBASIC12.96□□□□□ -0.33
CTSDP07339 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
CTSDP07339 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.96□□□□□ -0.33
CTSDP07339 AL138918.1-201ENST00000568306 659 ntBASIC12.96□□□□□ -0.33
CTSDP07339 AL773604.1-201ENST00000617417 272 ntBASIC12.96□□□□□ -0.33
CTSDP07339 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 AC148477.8-201ENST00000624298 468 ntBASIC12.96□□□□□ -0.33
CTSDP07339 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 FOXO1B-201ENST00000504678 1527 ntBASIC12.96□□□□□ -0.33
CTSDP07339 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CTSDP07339 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CTSDP07339 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.96□□□□□ -0.34
CTSDP07339 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
CTSDP07339 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.96□□□□□ -0.34
CTSDP07339 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
CTSDP07339 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.96□□□□□ -0.34
CTSDP07339 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.96□□□□□ -0.34
CTSDP07339 AC136759.1-202ENST00000530858 2194 ntBASIC12.96□□□□□ -0.34
CTSDP07339 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CTSDP07339 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 CICP11-201ENST00000434745 2827 ntBASIC12.95□□□□□ -0.34
CTSDP07339 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CTSDP07339 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 AC136604.1-201ENST00000418535 575 ntBASIC12.95□□□□□ -0.34
CTSDP07339 GHSR-202ENST00000427970 912 ntBASIC12.95□□□□□ -0.34
CTSDP07339 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 AC009947.1-201ENST00000444350 727 ntBASIC12.95□□□□□ -0.34
CTSDP07339 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.95□□□□□ -0.34
CTSDP07339 RNA5SP410-201ENST00000516285 106 ntBASIC12.95□□□□□ -0.34
CTSDP07339 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CTSDP07339 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms