Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC027601.5-201ENST00000624065 2482 ntBASIC17.52■□□□□ 0.39
TPM3P06753 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM3P06753 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM3P06753 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM3P06753 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 IGLL3P-201ENST00000412472 434 ntBASIC17.51■□□□□ 0.39
TPM3P06753 RHOQP3-201ENST00000437982 621 ntBASIC17.51■□□□□ 0.39
TPM3P06753 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 UNC93B6-202ENST00000528242 690 ntBASIC17.51■□□□□ 0.39
TPM3P06753 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM3P06753 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 AL121912.1-201ENST00000603683 238 ntBASIC17.51■□□□□ 0.39
TPM3P06753 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 AC010507.1-201ENST00000633895 436 ntBASIC17.51■□□□□ 0.39
TPM3P06753 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM3P06753 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM3P06753 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.51■□□□□ 0.39
TPM3P06753 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM3P06753 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 AC018892.3-201ENST00000623986 2499 ntBASIC17.5■□□□□ 0.39
TPM3P06753 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TPM3P06753 AC004987.2-201ENST00000395959 1148 ntBASIC17.5■□□□□ 0.39
TPM3P06753 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.5■□□□□ 0.39
TPM3P06753 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 AC098859.1-201ENST00000502915 1238 ntBASIC17.5■□□□□ 0.39
TPM3P06753 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.5■□□□□ 0.39
TPM3P06753 MIR4313-201ENST00000580760 101 ntBASIC17.5■□□□□ 0.39
TPM3P06753 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 FAM215A-202ENST00000632077 792 ntBASIC17.5■□□□□ 0.39
TPM3P06753 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.5■□□□□ 0.39
TPM3P06753 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TPM3P06753 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM3P06753 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM3P06753 AC117489.1-201ENST00000625169 3217 ntBASIC17.49■□□□□ 0.39
TPM3P06753 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 BNIP3P1-202ENST00000550043 1585 ntBASIC17.49■□□□□ 0.39
TPM3P06753 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms