Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.93■□□□□ 0.14
MT-ND3P03897 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.93■□□□□ 0.14
MT-ND3P03897 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.93■□□□□ 0.14
MT-ND3P03897 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 AL512356.2-201ENST00000546955 174 ntBASIC15.93■□□□□ 0.14
MT-ND3P03897 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 AC243562.1-201ENST00000560672 389 ntBASIC15.93■□□□□ 0.14
MT-ND3P03897 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.93■□□□□ 0.14
MT-ND3P03897 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.93■□□□□ 0.14
MT-ND3P03897 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.92■□□□□ 0.14
MT-ND3P03897 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.92■□□□□ 0.14
MT-ND3P03897 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 SPCS2P1-201ENST00000561636 679 ntBASIC15.92■□□□□ 0.14
MT-ND3P03897 AC093520.2-201ENST00000561830 333 ntBASIC15.92■□□□□ 0.14
MT-ND3P03897 AC024267.1-201ENST00000582320 895 ntBASIC15.92■□□□□ 0.14
MT-ND3P03897 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.92■□□□□ 0.14
MT-ND3P03897 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MT-ND3P03897 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND3P03897 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 AC023024.2-201ENST00000623561 1993 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AC005089.1-201ENST00000619486 2241 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MT-ND3P03897 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms