Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 FNTAP2-201ENST00000430308 634 ntBASIC16.75■□□□□ 0.27
CHRNA1P02708 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 COX5BP1-201ENST00000507622 393 ntBASIC16.75■□□□□ 0.27
CHRNA1P02708 AP003171.2-201ENST00000528208 925 ntBASIC16.75■□□□□ 0.27
CHRNA1P02708 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA1P02708 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.75■□□□□ 0.27
CHRNA1P02708 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 AC138028.6-201ENST00000616106 1482 ntBASIC16.74■□□□□ 0.27
CHRNA1P02708 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.74■□□□□ 0.27
CHRNA1P02708 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA1P02708 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.74■□□□□ 0.27
CHRNA1P02708 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 BX284668.4-201ENST00000453917 508 ntBASIC16.74■□□□□ 0.27
CHRNA1P02708 AC091804.1-201ENST00000486888 567 ntBASIC16.74■□□□□ 0.27
CHRNA1P02708 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.74■□□□□ 0.27
CHRNA1P02708 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA1P02708 AC073413.1-201ENST00000603927 732 ntBASIC16.74■□□□□ 0.27
CHRNA1P02708 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA1P02708 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.74■□□□□ 0.27
CHRNA1P02708 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA1P02708 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA1P02708 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRNA1P02708 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRNA1P02708 IGHJ2P-201ENST00000454480 60 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 AL391280.1-201ENST00000506969 1062 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 AC022616.1-201ENST00000518688 554 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 RN7SL713P-201ENST00000582127 302 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 PPY2P-201ENST00000582808 702 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 OR10B1P-201ENST00000601666 907 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 AL021578.1-201ENST00000613646 709 ntBASIC16.73■□□□□ 0.27
CHRNA1P02708 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRNA1P02708 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms