Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.84□□□□□ -0.19
APOC1P02654 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APOC1P02654 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 AC004835.2-201ENST00000603762 682 ntBASIC13.84□□□□□ -0.19
APOC1P02654 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 AC023157.3-201ENST00000619086 2088 ntBASIC13.84□□□□□ -0.19
APOC1P02654 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
APOC1P02654 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 AC090616.6-203ENST00000579186 1945 ntBASIC13.84□□□□□ -0.19
APOC1P02654 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
APOC1P02654 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.83□□□□□ -0.19
APOC1P02654 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOC1P02654 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOC1P02654 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
APOC1P02654 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOC1P02654 AC073347.1-201ENST00000421633 2643 ntBASIC13.83□□□□□ -0.19
APOC1P02654 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.83□□□□□ -0.2
APOC1P02654 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
APOC1P02654 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.83□□□□□ -0.2
APOC1P02654 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.83□□□□□ -0.2
APOC1P02654 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.83□□□□□ -0.2
APOC1P02654 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.83□□□□□ -0.2
APOC1P02654 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
APOC1P02654 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOC1P02654 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
APOC1P02654 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOC1P02654 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOC1P02654 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOC1P02654 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms