Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 ALG1L8P-201ENST00000533887 760 ntBASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 MIR3687-2-201ENST00000577708 61 ntBASIC14.04□□□□□ -0.16
HLA-DQA2P01906 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AC022145.2-201ENST00000598203 171 ntBASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 MIR3687-1-201ENST00000614492 61 ntBASIC14.04□□□□□ -0.16
HLA-DQA2P01906 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AC105339.1-204ENST00000636249 355 ntBASIC14.04□□□□□ -0.16
HLA-DQA2P01906 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA2P01906 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AC091951.1-201ENST00000512854 2465 ntBASIC14.03□□□□□ -0.16
HLA-DQA2P01906 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AL645939.2-201ENST00000427340 991 ntBASIC14.03□□□□□ -0.16
HLA-DQA2P01906 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 TCAF2P1-201ENST00000291129 2421 ntBASIC14.03□□□□□ -0.16
HLA-DQA2P01906 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQA2P01906 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms