Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-CO1P00395 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-CO1P00395 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 FAM86LP-201ENST00000478302 853 ntBASIC15.96■□□□□ 0.15
MT-CO1P00395 AC092552.1-201ENST00000547243 906 ntBASIC15.96■□□□□ 0.15
MT-CO1P00395 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-CO1P00395 AC036164.1-201ENST00000570544 333 ntBASIC15.96■□□□□ 0.15
MT-CO1P00395 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-CO1P00395 TMEM261P1-201ENST00000604899 340 ntBASIC15.96■□□□□ 0.15
MT-CO1P00395 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-CO1P00395 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-CO1P00395 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-CO1P00395 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MT-CO1P00395 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-CO1P00395 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-CO1P00395 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC098614.1-201ENST00000368528 745 ntBASIC15.95■□□□□ 0.14
MT-CO1P00395 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
MT-CO1P00395 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-CO1P00395 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC104596.2-201ENST00000512793 793 ntBASIC15.95■□□□□ 0.14
MT-CO1P00395 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
MT-CO1P00395 WFDC1-204ENST00000613603 549 ntBASIC15.95■□□□□ 0.14
MT-CO1P00395 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MT-CO1P00395 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-CO1P00395 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MT-CO1P00395 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-CO1P00395 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-CO1P00395 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MT-CO1P00395 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-CO1P00395 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 AC063926.2-201ENST00000623766 1308 ntBASIC15.94■□□□□ 0.14
MT-CO1P00395 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-CO1P00395 AC068587.6-202ENST00000641839 5619 ntBASIC15.94■□□□□ 0.14
MT-CO1P00395 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-CO1P00395 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MT-CO1P00395 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
MT-CO1P00395 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-CO1P00395 AC104640.1-201ENST00000562617 2109 ntBASIC15.94■□□□□ 0.14
MT-CO1P00395 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
MT-CO1P00395 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-CO1P00395 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-CO1P00395 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MT-CO1P00395 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
MT-CO1P00395 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-CO1P00395 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-CO1P00395 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms