Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLPXO76031 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.23□□□□□ -0.13
CLPXO76031 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 AC131009.4-201ENST00000624048 1740 ntBASIC14.23□□□□□ -0.13
CLPXO76031 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLPXO76031 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CLPXO76031 AC138969.2-201ENST00000532739 9932 ntBASIC14.23□□□□□ -0.13
CLPXO76031 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLPXO76031 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLPXO76031 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLPXO76031 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLPXO76031 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.22□□□□□ -0.13
CLPXO76031 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.22□□□□□ -0.13
CLPXO76031 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.22□□□□□ -0.13
CLPXO76031 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 RNPS1P1-201ENST00000507437 918 ntBASIC14.22□□□□□ -0.13
CLPXO76031 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.22□□□□□ -0.13
CLPXO76031 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.22□□□□□ -0.13
CLPXO76031 NKAPP1-205ENST00000585790 367 ntBASIC14.22□□□□□ -0.13
CLPXO76031 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 NCF1C-201ENST00000438382 1427 ntBASIC14.22□□□□□ -0.13
CLPXO76031 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLPXO76031 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.22□□□□□ -0.13
CLPXO76031 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPXO76031 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPXO76031 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPXO76031 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CLPXO76031 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPXO76031 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
CLPXO76031 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPXO76031 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPXO76031 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLPXO76031 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLPXO76031 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPXO76031 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPXO76031 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPXO76031 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms