Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL109954.1-202ENST00000564051 2148 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 AL391825.1-201ENST00000457671 1364 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.87□□□□□ -0.03
LCMT2O60294 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.87□□□□□ -0.03
LCMT2O60294 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LCMT2O60294 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.87□□□□□ -0.03
LCMT2O60294 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.87□□□□□ -0.03
LCMT2O60294 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.87□□□□□ -0.03
LCMT2O60294 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.87□□□□□ -0.03
LCMT2O60294 AC123567.1-201ENST00000548294 1261 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.87□□□□□ -0.03
LCMT2O60294 RRP7BP-205ENST00000566851 833 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 AC036164.1-201ENST00000570544 333 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.87□□□□□ -0.03
LCMT2O60294 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.87□□□□□ -0.03
LCMT2O60294 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.87□□□□□ -0.03
LCMT2O60294 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LCMT2O60294 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LCMT2O60294 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 KRT8P44-201ENST00000441609 1350 ntBASIC14.86□□□□□ -0.03
LCMT2O60294 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 AC104640.1-201ENST00000562617 2109 ntBASIC14.86□□□□□ -0.03
LCMT2O60294 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 RPL5P21-201ENST00000404620 815 ntBASIC14.86□□□□□ -0.03
LCMT2O60294 AC087499.6-201ENST00000411576 835 ntBASIC14.86□□□□□ -0.03
LCMT2O60294 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.86□□□□□ -0.03
LCMT2O60294 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.86□□□□□ -0.03
LCMT2O60294 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.86□□□□□ -0.03
LCMT2O60294 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.86□□□□□ -0.03
LCMT2O60294 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.86□□□□□ -0.03
LCMT2O60294 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.86□□□□□ -0.03
LCMT2O60294 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LCMT2O60294 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.86□□□□□ -0.03
LCMT2O60294 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCMT2O60294 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms