Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF13O43567 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.23□□□□□ -0.13
RNF13O43567 BANF1P1-201ENST00000553684 263 ntBASIC14.23□□□□□ -0.13
RNF13O43567 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF13O43567 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF13O43567 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF13O43567 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF13O43567 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF13O43567 OR2I1P-210ENST00000642037 4691 ntBASIC14.23□□□□□ -0.13
RNF13O43567 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF13O43567 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNF13O43567 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF13O43567 AC127383.1-201ENST00000444697 1800 ntBASIC14.22□□□□□ -0.13
RNF13O43567 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.22□□□□□ -0.13
RNF13O43567 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 AZGP1P1-201ENST00000411909 902 ntBASIC14.22□□□□□ -0.13
RNF13O43567 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.22□□□□□ -0.13
RNF13O43567 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.22□□□□□ -0.13
RNF13O43567 AP001059.3-201ENST00000619053 235 ntBASIC14.22□□□□□ -0.13
RNF13O43567 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
RNF13O43567 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 AGAP7P-201ENST00000582299 2062 ntBASIC14.22□□□□□ -0.13
RNF13O43567 AGAP14-201ENST00000624701 2060 ntBASIC14.22□□□□□ -0.13
RNF13O43567 AC013726.1-201ENST00000563747 2285 ntBASIC14.22□□□□□ -0.13
RNF13O43567 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF13O43567 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF13O43567 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNF13O43567 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RNF13O43567 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF13O43567 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNF13O43567 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RNF13O43567 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF13O43567 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF13O43567 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF13O43567 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF13O43567 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF13O43567 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF13O43567 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
RNF13O43567 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF13O43567 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RNF13O43567 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNF13O43567 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF13O43567 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms