Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.39■□□□□ 0.86
APAF1O14727 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.39■□□□□ 0.86
APAF1O14727 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
APAF1O14727 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
APAF1O14727 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 AC104457.1-201ENST00000401024 814 ntBASIC20.39■□□□□ 0.85
APAF1O14727 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.39■□□□□ 0.85
APAF1O14727 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 AC104596.2-201ENST00000512793 793 ntBASIC20.39■□□□□ 0.85
APAF1O14727 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.39■□□□□ 0.85
APAF1O14727 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.39■□□□□ 0.85
APAF1O14727 AC140912.1-201ENST00000577171 1054 ntBASIC20.39■□□□□ 0.85
APAF1O14727 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.39■□□□□ 0.85
APAF1O14727 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.39■□□□□ 0.85
APAF1O14727 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 AL645728.2-202ENST00000641679 227 ntBASIC20.39■□□□□ 0.85
APAF1O14727 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.39■□□□□ 0.85
APAF1O14727 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
APAF1O14727 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.39■□□□□ 0.85
APAF1O14727 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
APAF1O14727 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APAF1O14727 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.38■□□□□ 0.85
APAF1O14727 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 GHSR-202ENST00000427970 912 ntBASIC20.38■□□□□ 0.85
APAF1O14727 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.38■□□□□ 0.85
APAF1O14727 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.38■□□□□ 0.85
APAF1O14727 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
APAF1O14727 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
APAF1O14727 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.38■□□□□ 0.85
APAF1O14727 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.38■□□□□ 0.85
APAF1O14727 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.38■□□□□ 0.85
APAF1O14727 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
APAF1O14727 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.38■□□□□ 0.85
APAF1O14727 AP000845.1-201ENST00000581677 2131 ntBASIC20.38■□□□□ 0.85
APAF1O14727 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 MROH4P-201ENST00000431302 1578 ntBASIC20.38■□□□□ 0.85
APAF1O14727 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APAF1O14727 INTS4P2-202ENST00000614726 2019 ntBASIC20.37■□□□□ 0.85
APAF1O14727 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
APAF1O14727 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.37■□□□□ 0.85
APAF1O14727 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.37■□□□□ 0.85
APAF1O14727 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.37■□□□□ 0.85
APAF1O14727 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
APAF1O14727 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.37■□□□□ 0.85
APAF1O14727 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 AC120045.2-201ENST00000567334 178 ntBASIC20.37■□□□□ 0.85
APAF1O14727 AC124283.3-201ENST00000570869 594 ntBASIC20.37■□□□□ 0.85
APAF1O14727 WFDC1-204ENST00000613603 549 ntBASIC20.37■□□□□ 0.85
APAF1O14727 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.37■□□□□ 0.85
APAF1O14727 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.37■□□□□ 0.85
APAF1O14727 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
APAF1O14727 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APAF1O14727 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.37■□□□□ 0.85
APAF1O14727 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms