Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 KRT8P22-201ENST00000562317 1415 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 AC234783.1-201ENST00000441761 496 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 SLED1-202ENST00000512051 380 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 AL391069.4-201ENST00000609583 481 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 MIR6805-201ENST00000615055 62 ntBASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA3F8WFD2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AL365209.1-201ENST00000624418 6473 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 MIR1909-201ENST00000411312 80 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AL442647.2-201ENST00000429864 857 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AC015936.2-201ENST00000593177 259 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AC008735.3-201ENST00000596646 500 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AL512343.1-201ENST00000605837 169 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 CU634019.7-201ENST00000624153 1185 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 FP236241.2-201ENST00000624906 1185 ntBASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA3F8WFD2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms