Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AC104794.3-201ENST00000566840 1248 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AC000095.1-201ENST00000603208 874 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AC023157.3-201ENST00000619086 2088 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AC006486.2-201ENST00000624246 2199 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 KRT8P44-201ENST00000441609 1350 ntBASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 MEP1AP4-201ENST00000423244 1087 ntBASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 SPDYE18-201ENST00000510091 1050 ntBASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 DOC2GP-202ENST00000514950 1163 ntBASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AC009118.2-201ENST00000613275 655 ntBASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AJ011932.1-201ENST00000621707 465 ntBASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN4Q9NRR5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms