Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 AC104692.2-201ENST00000603054 253 ntBASIC17.41■□□□□ 0.38
CBX8Q9HC52 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX8Q9HC52 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CBX8Q9HC52 AL161772.1-201ENST00000610494 4412 ntBASIC17.41■□□□□ 0.38
CBX8Q9HC52 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX8Q9HC52 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX8Q9HC52 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AL135744.1-201ENST00000565098 629 ntBASIC17.4■□□□□ 0.38
CBX8Q9HC52 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 RN7SL510P-201ENST00000581311 263 ntBASIC17.4■□□□□ 0.38
CBX8Q9HC52 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AL513190.1-201ENST00000621254 727 ntBASIC17.4■□□□□ 0.38
CBX8Q9HC52 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 AKAP8P1-201ENST00000434743 1349 ntBASIC17.4■□□□□ 0.38
CBX8Q9HC52 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX8Q9HC52 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX8Q9HC52 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX8Q9HC52 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX8Q9HC52 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX8Q9HC52 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 MRPL3P1-201ENST00000400109 1033 ntBASIC17.39■□□□□ 0.37
CBX8Q9HC52 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 AC112191.1-201ENST00000523689 701 ntBASIC17.39■□□□□ 0.37
CBX8Q9HC52 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX8Q9HC52 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX8Q9HC52 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms