Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AC069262.1-201ENST00000539058 672 ntBASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CETN4P-206ENST00000642099 2168 ntBASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 SPDYE12P-201ENST00000618416 771 ntBASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF3BQ9BZI7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 AC025048.3-201ENST00000590609 569 ntBASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 AC005702.4-201ENST00000618393 416 ntBASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 Z92544.3-201ENST00000624747 417 ntBASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms