Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC000095.1-201ENST00000603208 874 ntBASIC18.42■□□□□ 0.54
NEK1Q96PY6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AGAP7P-201ENST00000582299 2062 ntBASIC18.42■□□□□ 0.54
NEK1Q96PY6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AGAP14-201ENST00000624701 2060 ntBASIC18.42■□□□□ 0.54
NEK1Q96PY6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 BCRP1-201ENST00000444246 691 ntBASIC18.41■□□□□ 0.54
NEK1Q96PY6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 AL391069.4-201ENST00000609583 481 ntBASIC18.41■□□□□ 0.54
NEK1Q96PY6 AC004790.1-201ENST00000612686 536 ntBASIC18.41■□□□□ 0.54
NEK1Q96PY6 AL158212.4-201ENST00000624062 1286 ntBASIC18.41■□□□□ 0.54
NEK1Q96PY6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NEK1Q96PY6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NEK1Q96PY6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.4■□□□□ 0.54
NEK1Q96PY6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 MROH4P-201ENST00000431302 1578 ntBASIC18.4■□□□□ 0.54
NEK1Q96PY6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 AC244107.1-201ENST00000442033 332 ntBASIC18.4■□□□□ 0.54
NEK1Q96PY6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
NEK1Q96PY6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEK1Q96PY6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NEK1Q96PY6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NEK1Q96PY6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NEK1Q96PY6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 AC104794.3-201ENST00000566840 1248 ntBASIC18.39■□□□□ 0.53
NEK1Q96PY6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms