Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC097359.2-201ENST00000604992 2389 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC134407.2-201ENST00000625089 1978 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC108073.2-201ENST00000464002 357 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 KRT18P34-201ENST00000488218 1270 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CXCL1P1-201ENST00000502804 216 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC073648.2-201ENST00000510116 352 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC008735.5-201ENST00000623544 497 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC004790.2-201ENST00000623588 572 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 AC005593.1-201ENST00000624894 515 ntBASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BEST4Q8NFU0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.52□□□□□ -0.24
BEST4Q8NFU0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 AC005562.1-201ENST00000583030 3219 ntBASIC13.52□□□□□ -0.24
BEST4Q8NFU0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
BEST4Q8NFU0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AKR1C7P-201ENST00000305623 895 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AL513480.1-201ENST00000451731 511 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AF238378.1-201ENST00000526806 358 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 MIR4321-201ENST00000592276 80 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms