Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 CICP20-201ENST00000443330 2801 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.56■□□□□ 0.08
APLFQ8IW19 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 AC097493.3-201ENST00000509725 367 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.56■□□□□ 0.08
APLFQ8IW19 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 AC027307.2-201ENST00000591252 911 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
APLFQ8IW19 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.56■□□□□ 0.08
APLFQ8IW19 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 TOP3BP1-201ENST00000420768 1380 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.56■□□□□ 0.08
APLFQ8IW19 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.56■□□□□ 0.08
APLFQ8IW19 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
APLFQ8IW19 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.56■□□□□ 0.08
APLFQ8IW19 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
APLFQ8IW19 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.55■□□□□ 0.08
APLFQ8IW19 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 AP001350.2-201ENST00000625104 1094 ntBASIC15.55■□□□□ 0.08
APLFQ8IW19 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 AC097376.2-205ENST00000610159 5334 ntBASIC15.55■□□□□ 0.08
APLFQ8IW19 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APLFQ8IW19 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APLFQ8IW19 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.55■□□□□ 0.08
APLFQ8IW19 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.54■□□□□ 0.08
APLFQ8IW19 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
APLFQ8IW19 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms