Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXR1Q6PIV2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXR1Q6PIV2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 AL592309.1-201ENST00000443127 649 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 AC087163.2-201ENST00000457299 853 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 SLC25A6P2-201ENST00000497974 877 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 KRT8P48-201ENST00000515599 1220 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 KRT8P49-201ENST00000604166 1432 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 REXO1L1P-202ENST00000608646 1974 ntBASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXR1Q6PIV2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AL355306.1-201ENST00000415580 579 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 KRT18P32-201ENST00000424695 1287 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 INGX-202ENST00000489074 768 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AC089987.1-201ENST00000551654 2209 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms