Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 KRT18P64-201ENST00000434946 1219 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 RN7SL752P-201ENST00000463779 287 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SLED1-202ENST00000512051 380 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 RAB43P1-201ENST00000561790 589 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 MIR4525-201ENST00000580000 75 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 LINC01115-203ENST00000606068 577 ntBASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC4Q5GLZ8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AC104640.1-201ENST00000562617 2109 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 DGCR5-201ENST00000399539 862 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 RPL13P2-201ENST00000440687 659 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AC022210.1-201ENST00000449856 793 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AC011495.1-201ENST00000498085 584 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ZNF890P-202ENST00000530367 1156 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AL133338.1-201ENST00000565695 1517 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 AC144831.1-201ENST00000573312 2656 ntBASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC4Q5GLZ8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC4Q5GLZ8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms