Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.3■□□□□ 0.2
CBX1P83916 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.3■□□□□ 0.2
CBX1P83916 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.3■□□□□ 0.2
CBX1P83916 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.3■□□□□ 0.2
CBX1P83916 TERC-201ENST00000602385 541 ntBASIC16.3■□□□□ 0.2
CBX1P83916 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.3■□□□□ 0.2
CBX1P83916 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CBX1P83916 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX1P83916 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX1P83916 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 AC022497.1-201ENST00000624916 3691 ntBASIC16.29■□□□□ 0.2
CBX1P83916 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX1P83916 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 ACTG1P4-201ENST00000425123 1122 ntBASIC16.29■□□□□ 0.2
CBX1P83916 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 KRT18P48-201ENST00000434763 852 ntBASIC16.29■□□□□ 0.2
CBX1P83916 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX1P83916 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 AL590326.2-201ENST00000625139 305 ntBASIC16.29■□□□□ 0.2
CBX1P83916 AC116562.4-202ENST00000641738 218 ntBASIC16.29■□□□□ 0.2
CBX1P83916 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX1P83916 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX1P83916 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX1P83916 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX1P83916 AL031595.1-201ENST00000623969 4709 ntBASIC16.28■□□□□ 0.2
CBX1P83916 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX1P83916 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX1P83916 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms