Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.39■□□□□ 0.21
USP46P62068 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.39■□□□□ 0.21
USP46P62068 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.39■□□□□ 0.21
USP46P62068 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.39■□□□□ 0.21
USP46P62068 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.39■□□□□ 0.21
USP46P62068 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP46P62068 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP46P62068 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 AC144831.1-201ENST00000573312 2656 ntBASIC16.38■□□□□ 0.21
USP46P62068 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 C1QBPP1-201ENST00000400117 770 ntBASIC16.38■□□□□ 0.21
USP46P62068 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.38■□□□□ 0.21
USP46P62068 AL162726.2-201ENST00000438986 1017 ntBASIC16.38■□□□□ 0.21
USP46P62068 GPR53P-205ENST00000457298 1084 ntBASIC16.38■□□□□ 0.21
USP46P62068 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 USP32P1-208ENST00000506594 1164 ntBASIC16.38■□□□□ 0.21
USP46P62068 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.38■□□□□ 0.21
USP46P62068 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.38■□□□□ 0.21
USP46P62068 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.38■□□□□ 0.21
USP46P62068 AL008721.1-201ENST00000609964 604 ntBASIC16.38■□□□□ 0.21
USP46P62068 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.38■□□□□ 0.21
USP46P62068 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.38■□□□□ 0.21
USP46P62068 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
USP46P62068 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
USP46P62068 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.38■□□□□ 0.21
USP46P62068 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP46P62068 AC092127.1-201ENST00000567093 3455 ntBASIC16.38■□□□□ 0.21
USP46P62068 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.37■□□□□ 0.21
USP46P62068 DRD5P1-201ENST00000456605 1438 ntBASIC16.37■□□□□ 0.21
USP46P62068 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
USP46P62068 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.37■□□□□ 0.21
USP46P62068 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 CICP13-201ENST00000422015 2789 ntBASIC16.37■□□□□ 0.21
USP46P62068 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.37■□□□□ 0.21
USP46P62068 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 ACA64.2-201ENST00000459014 129 ntBASIC16.37■□□□□ 0.21
USP46P62068 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.37■□□□□ 0.21
USP46P62068 IGHV3-71-201ENST00000523324 359 ntBASIC16.37■□□□□ 0.21
USP46P62068 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.37■□□□□ 0.21
USP46P62068 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 MIR5189-201ENST00000577370 114 ntBASIC16.37■□□□□ 0.21
USP46P62068 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.37■□□□□ 0.21
USP46P62068 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.37■□□□□ 0.21
USP46P62068 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 AC104640.1-201ENST00000562617 2109 ntBASIC16.37■□□□□ 0.21
USP46P62068 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.37■□□□□ 0.21
USP46P62068 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP46P62068 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP46P62068 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms