Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 MIR943-201ENST00000401286 94 ntBASIC13.96□□□□□ -0.17
CLRN1P58418 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 TREML5P-201ENST00000421694 576 ntBASIC13.96□□□□□ -0.17
CLRN1P58418 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.96□□□□□ -0.17
CLRN1P58418 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.96□□□□□ -0.17
CLRN1P58418 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.96□□□□□ -0.17
CLRN1P58418 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.96□□□□□ -0.17
CLRN1P58418 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.96□□□□□ -0.17
CLRN1P58418 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.96□□□□□ -0.17
CLRN1P58418 AL158211.3-201ENST00000607385 239 ntBASIC13.96□□□□□ -0.17
CLRN1P58418 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.96□□□□□ -0.17
CLRN1P58418 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 AC067750.1-201ENST00000608826 6545 ntBASIC13.96□□□□□ -0.18
CLRN1P58418 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.96□□□□□ -0.18
CLRN1P58418 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLRN1P58418 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLRN1P58418 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 AC023157.3-201ENST00000619086 2088 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 Z97205.2-201ENST00000564697 1639 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.95□□□□□ -0.18
CLRN1P58418 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 AL512361.1-201ENST00000554200 418 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.95□□□□□ -0.18
CLRN1P58418 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.95□□□□□ -0.18
CLRN1P58418 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 AC025048.3-201ENST00000590609 569 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.95□□□□□ -0.18
CLRN1P58418 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.95□□□□□ -0.18
CLRN1P58418 AC005702.4-201ENST00000618393 416 ntBASIC13.95□□□□□ -0.18
CLRN1P58418 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLRN1P58418 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.95□□□□□ -0.18
CLRN1P58418 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.95□□□□□ -0.18
CLRN1P58418 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms