Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLDN20P56880 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN20P56880 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN20P56880 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN20P56880 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN20P56880 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN20P56880 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.33□□□□□ -0.12
CLDN20P56880 SDHAP3-202ENST00000515467 728 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN20P56880 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN20P56880 AC025048.3-201ENST00000590609 569 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 AC005702.4-201ENST00000618393 416 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 AC008761.3-201ENST00000624803 892 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 AC007191.1-201ENST00000623179 2995 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 LINC00528-201ENST00000600723 2160 ntBASIC14.33□□□□□ -0.12
CLDN20P56880 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN20P56880 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 TMBIM7P-203ENST00000641617 1718 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN20P56880 BTBD7P1-201ENST00000447253 1453 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLDN20P56880 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 FAM207CP-201ENST00000443486 507 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 PHKG1P2-201ENST00000457537 863 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN20P56880 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 SPDYE18-201ENST00000510091 1050 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.32□□□□□ -0.12
CLDN20P56880 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.32□□□□□ -0.12
CLDN20P56880 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLDN20P56880 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 AC011477.6-201ENST00000604980 1927 ntBASIC14.32□□□□□ -0.12
CLDN20P56880 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLDN20P56880 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN20P56880 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN20P56880 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN20P56880 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDN20P56880 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms