Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.67■□□□□ 0.26
RAD23BP54727 TPRX2P-201ENST00000535362 881 ntBASIC16.67■□□□□ 0.26
RAD23BP54727 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.67■□□□□ 0.26
RAD23BP54727 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
RAD23BP54727 AC087481.3-201ENST00000602886 1894 ntBASIC16.67■□□□□ 0.26
RAD23BP54727 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAD23BP54727 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.67■□□□□ 0.26
RAD23BP54727 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAD23BP54727 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAD23BP54727 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.66■□□□□ 0.26
RAD23BP54727 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 KRT18P43-201ENST00000469825 1281 ntBASIC16.66■□□□□ 0.26
RAD23BP54727 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
RAD23BP54727 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.66■□□□□ 0.26
RAD23BP54727 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.66■□□□□ 0.26
RAD23BP54727 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAD23BP54727 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 CLK3P2-201ENST00000427566 1453 ntBASIC16.66■□□□□ 0.26
RAD23BP54727 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
RAD23BP54727 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAD23BP54727 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 TMBIM7P-203ENST00000641617 1718 ntBASIC16.65■□□□□ 0.26
RAD23BP54727 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.65■□□□□ 0.26
RAD23BP54727 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.65■□□□□ 0.26
RAD23BP54727 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 RARRES2P5-201ENST00000564013 466 ntBASIC16.65■□□□□ 0.26
RAD23BP54727 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RAD23BP54727 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 PPT1-215ENST00000641471 2368 ntBASIC16.65■□□□□ 0.26
RAD23BP54727 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.65■□□□□ 0.26
RAD23BP54727 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.65■□□□□ 0.26
RAD23BP54727 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms