Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TNNI2P48788 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TNNI2P48788 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TNNI2P48788 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 KLF2P2-201ENST00000416807 1039 ntBASIC18.41■□□□□ 0.54
TNNI2P48788 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.41■□□□□ 0.54
TNNI2P48788 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.41■□□□□ 0.54
TNNI2P48788 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.41■□□□□ 0.54
TNNI2P48788 AL590640.2-201ENST00000457038 527 ntBASIC18.41■□□□□ 0.54
TNNI2P48788 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.41■□□□□ 0.54
TNNI2P48788 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 EEF1DP1-201ENST00000585891 896 ntBASIC18.41■□□□□ 0.54
TNNI2P48788 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.41■□□□□ 0.54
TNNI2P48788 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TNNI2P48788 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TNNI2P48788 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
TNNI2P48788 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.41■□□□□ 0.54
TNNI2P48788 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 LINC02199-201ENST00000506655 2702 ntBASIC18.41■□□□□ 0.54
TNNI2P48788 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TNNI2P48788 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
TNNI2P48788 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNNI2P48788 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TNNI2P48788 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 AC015818.8-201ENST00000587907 1519 ntBASIC18.4■□□□□ 0.54
TNNI2P48788 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TNNI2P48788 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TNNI2P48788 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TNNI2P48788 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 TPM3P8-201ENST00000330554 643 ntBASIC18.4■□□□□ 0.54
TNNI2P48788 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.4■□□□□ 0.54
TNNI2P48788 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.4■□□□□ 0.54
TNNI2P48788 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.4■□□□□ 0.54
TNNI2P48788 RN7SL48P-201ENST00000579283 293 ntBASIC18.4■□□□□ 0.54
TNNI2P48788 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.4■□□□□ 0.54
TNNI2P48788 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.4■□□□□ 0.54
TNNI2P48788 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.4■□□□□ 0.54
TNNI2P48788 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNNI2P48788 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.4■□□□□ 0.54
TNNI2P48788 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.4■□□□□ 0.54
TNNI2P48788 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNNI2P48788 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNNI2P48788 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNNI2P48788 AL354989.2-201ENST00000435838 1540 ntBASIC18.39■□□□□ 0.54
TNNI2P48788 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNNI2P48788 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.39■□□□□ 0.53
TNNI2P48788 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 RNU1-114P-201ENST00000365297 166 ntBASIC18.39■□□□□ 0.53
TNNI2P48788 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TNNI2P48788 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.39■□□□□ 0.53
TNNI2P48788 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.39■□□□□ 0.53
TNNI2P48788 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.39■□□□□ 0.53
TNNI2P48788 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.39■□□□□ 0.53
TNNI2P48788 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.39■□□□□ 0.53
TNNI2P48788 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
TNNI2P48788 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.39■□□□□ 0.53
TNNI2P48788 AC005695.3-201ENST00000614522 232 ntBASIC18.39■□□□□ 0.53
TNNI2P48788 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TNNI2P48788 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.39■□□□□ 0.53
TNNI2P48788 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNNI2P48788 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.38■□□□□ 0.53
TNNI2P48788 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNNI2P48788 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.38■□□□□ 0.53
TNNI2P48788 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TNNI2P48788 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TNNI2P48788 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms