Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRA4P48169 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.67□□□□□ -0.06
GABRA4P48169 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRA4P48169 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
GABRA4P48169 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 RNU1-114P-201ENST00000365297 166 ntBASIC14.67□□□□□ -0.06
GABRA4P48169 MIR658-201ENST00000385210 100 ntBASIC14.67□□□□□ -0.06
GABRA4P48169 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.67□□□□□ -0.06
GABRA4P48169 FTH1P14-201ENST00000482930 551 ntBASIC14.67□□□□□ -0.06
GABRA4P48169 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRA4P48169 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.67□□□□□ -0.06
GABRA4P48169 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 MIR6805-201ENST00000615055 62 ntBASIC14.67□□□□□ -0.06
GABRA4P48169 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRA4P48169 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
GABRA4P48169 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
GABRA4P48169 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRA4P48169 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
GABRA4P48169 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRA4P48169 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRA4P48169 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
GABRA4P48169 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 AC007950.2-201ENST00000615045 2347 ntBASIC14.66□□□□□ -0.06
GABRA4P48169 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
GABRA4P48169 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.66□□□□□ -0.06
GABRA4P48169 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
GABRA4P48169 AC004066.1-201ENST00000502488 802 ntBASIC14.66□□□□□ -0.06
GABRA4P48169 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 SAMD11P1-201ENST00000571429 661 ntBASIC14.66□□□□□ -0.06
GABRA4P48169 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 AC244669.2-201ENST00000612320 853 ntBASIC14.66□□□□□ -0.06
GABRA4P48169 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRA4P48169 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRA4P48169 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRA4P48169 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms