Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE6BP35913 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 AL805961.1-203ENST00000641078 1258 ntBASIC18.96■□□□□ 0.63
PDE6BP35913 AL645728.2-202ENST00000641679 227 ntBASIC18.96■□□□□ 0.63
PDE6BP35913 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDE6BP35913 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE6BP35913 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PDE6BP35913 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE6BP35913 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PDE6BP35913 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE6BP35913 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.95■□□□□ 0.62
PDE6BP35913 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.95■□□□□ 0.62
PDE6BP35913 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.95■□□□□ 0.62
PDE6BP35913 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.95■□□□□ 0.62
PDE6BP35913 AC138466.3-201ENST00000619983 221 ntBASIC18.95■□□□□ 0.62
PDE6BP35913 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE6BP35913 AC006480.2-201ENST00000609770 1337 ntBASIC18.95■□□□□ 0.62
PDE6BP35913 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDE6BP35913 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE6BP35913 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6BP35913 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6BP35913 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 SAMD11P1-201ENST00000571429 661 ntBASIC18.94■□□□□ 0.62
PDE6BP35913 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PDE6BP35913 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
PDE6BP35913 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6BP35913 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6BP35913 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 AC124067.4-201ENST00000519691 2379 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDE6BP35913 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms