Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RXRBP28702 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RXRBP28702 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RXRBP28702 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
RXRBP28702 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRBP28702 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 AC106047.2-201ENST00000511723 743 ntBASIC19.84■□□□□ 0.77
RXRBP28702 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RXRBP28702 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RXRBP28702 AC008825.2-201ENST00000603374 718 ntBASIC19.84■□□□□ 0.77
RXRBP28702 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.84■□□□□ 0.77
RXRBP28702 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRBP28702 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRBP28702 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.84■□□□□ 0.77
RXRBP28702 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.84■□□□□ 0.77
RXRBP28702 AC022188.1-201ENST00000620960 1664 ntBASIC19.84■□□□□ 0.77
RXRBP28702 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRBP28702 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RXRBP28702 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RXRBP28702 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RXRBP28702 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 AC020931.1-201ENST00000589622 1346 ntBASIC19.83■□□□□ 0.77
RXRBP28702 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC19.83■□□□□ 0.77
RXRBP28702 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RXRBP28702 JPT2-203ENST00000382711 894 ntTSL 4 BASIC19.83■□□□□ 0.77
RXRBP28702 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.83■□□□□ 0.77
RXRBP28702 ACTG1P19-201ENST00000418987 1116 ntBASIC19.83■□□□□ 0.77
RXRBP28702 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRBP28702 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRBP28702 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRBP28702 CHCHD2P2-201ENST00000503744 321 ntBASIC19.83■□□□□ 0.77
RXRBP28702 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC19.83■□□□□ 0.77
RXRBP28702 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RXRBP28702 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
RXRBP28702 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
RXRBP28702 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RXRBP28702 WASH7P-201ENST00000488147 1351 ntBASIC19.83■□□□□ 0.76
RXRBP28702 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.83■□□□□ 0.76
RXRBP28702 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RXRBP28702 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RXRBP28702 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RXRBP28702 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RXRBP28702 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRBP28702 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRBP28702 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRBP28702 DUX4L47-201ENST00000566374 394 ntBASIC19.82■□□□□ 0.76
RXRBP28702 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 MIR3188-201ENST00000583494 85 ntBASIC19.82■□□□□ 0.76
RXRBP28702 MIR6746-201ENST00000620971 63 ntBASIC19.82■□□□□ 0.76
RXRBP28702 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRBP28702 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRBP28702 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.81■□□□□ 0.76
RXRBP28702 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
RXRBP28702 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RXRBP28702 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 KRT17P5-201ENST00000332088 839 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms