Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.63□□□□□ -0.07
CHMP24386 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CHMP24386 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.63□□□□□ -0.07
CHMP24386 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP24386 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.63□□□□□ -0.07
CHMP24386 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHMP24386 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHMP24386 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP24386 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP24386 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP24386 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP24386 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHMP24386 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHMP24386 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP24386 AL139010.1-201ENST00000454878 894 ntBASIC14.62□□□□□ -0.07
CHMP24386 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 AC093214.1-201ENST00000511688 1107 ntBASIC14.62□□□□□ -0.07
CHMP24386 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 IGHV3-42-201ENST00000520410 361 ntBASIC14.62□□□□□ -0.07
CHMP24386 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 BANF1P1-201ENST00000553684 263 ntBASIC14.62□□□□□ -0.07
CHMP24386 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.62□□□□□ -0.07
CHMP24386 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 AJ011932.1-201ENST00000621707 465 ntBASIC14.62□□□□□ -0.07
CHMP24386 AC104581.4-201ENST00000623126 3052 ntBASIC14.62□□□□□ -0.07
CHMP24386 CETN4P-206ENST00000642099 2168 ntBASIC14.62□□□□□ -0.07
CHMP24386 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP24386 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP24386 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP24386 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP24386 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHMP24386 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP24386 AC026748.1-201ENST00000624349 3251 ntBASIC14.61□□□□□ -0.07
CHMP24386 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHMP24386 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP24386 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHMP24386 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP24386 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP24386 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 MTND6P24-201ENST00000440466 518 ntBASIC14.61□□□□□ -0.07
CHMP24386 BCRP1-201ENST00000444246 691 ntBASIC14.61□□□□□ -0.07
CHMP24386 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CHMP24386 INGX-202ENST00000489074 768 ntBASIC14.61□□□□□ -0.07
CHMP24386 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP24386 AC027369.6-201ENST00000525520 931 ntBASIC14.61□□□□□ -0.07
CHMP24386 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP24386 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 AL390955.2-201ENST00000603032 514 ntBASIC14.61□□□□□ -0.07
CHMP24386 AL133215.2-201ENST00000609242 977 ntBASIC14.61□□□□□ -0.07
CHMP24386 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP24386 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP24386 CICP4-201ENST00000447359 2812 ntBASIC14.61□□□□□ -0.07
CHMP24386 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP24386 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms